Logistic regression - overview
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Logistic regression | Wilcoxon signed-rank test | Cochran's Q test |
You cannot compare more than 3 methods |
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Independent variables | Independent variable | Independent/grouping variable | |
One or more quantitative of interval or ratio level and/or one or more categorical with independent groups, transformed into code variables | 2 paired groups | One within subject factor ($\geq 2$ related groups) | |
Dependent variable | Dependent variable | Dependent variable | |
One categorical with 2 independent groups | One quantitative of interval or ratio level | One categorical with 2 independent groups | |
Null hypothesis | Null hypothesis | Null hypothesis | |
Model chi-squared test for the complete regression model:
| H0: $m = 0$
Here $m$ is the population median of the difference scores. A difference score is the difference between the first score of a pair and the second score of a pair. Several different formulations of the null hypothesis can be found in the literature, and we do not agree with all of them. Make sure you (also) learn the one that is given in your text book or by your teacher. | H0: $\pi_1 = \pi_2 = \ldots = \pi_I$
Here $\pi_1$ is the population proportion of 'successes' for group 1, $\pi_2$ is the population proportion of 'successes' for group 2, and $\pi_I$ is the population proportion of 'successes' for group $I.$ | |
Alternative hypothesis | Alternative hypothesis | Alternative hypothesis | |
Model chi-squared test for the complete regression model:
| H1 two sided: $m \neq 0$ H1 right sided: $m > 0$ H1 left sided: $m < 0$ | H1: not all population proportions are equal | |
Assumptions | Assumptions | Assumptions | |
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Test statistic | Test statistic | Test statistic | |
Model chi-squared test for the complete regression model:
The wald statistic can be defined in two ways:
Likelihood ratio chi-squared test for individual $\beta_k$:
| Two different types of test statistics can be used, but both will result in the same test outcome. We will denote the first option the $W_1$ statistic (also known as the $T$ statistic), and the second option the $W_2$ statistic.
In order to compute each of the test statistics, follow the steps below:
| If a failure is scored as 0 and a success is scored as 1:
$Q = k(k - 1) \dfrac{\sum_{groups} \Big (\mbox{group total} - \frac{\mbox{grand total}}{k} \Big)^2}{\sum_{blocks} \mbox{block total} \times (k - \mbox{block total})}$ Here $k$ is the number of related groups (usually the number of repeated measurements), a group total is the sum of the scores in a group, a block total is the sum of the scores in a block (usually a subject), and the grand total is the sum of all the scores. Before computing $Q$, first exclude blocks with equal scores in all $k$ groups. | |
Sampling distribution of $X^2$ and of the Wald statistic if H0 were true | Sampling distribution of $W_1$ and of $W_2$ if H0 were true | Sampling distribution of $Q$ if H0 were true | |
Sampling distribution of $X^2$, as computed in the model chi-squared test for the complete model:
| Sampling distribution of $W_1$:
If $N_r$ is large, $W_1$ is approximately normally distributed with mean $\mu_{W_1}$ and standard deviation $\sigma_{W_1}$ if the null hypothesis were true. Here $$\mu_{W_1} = \frac{N_r(N_r + 1)}{4}$$ $$\sigma_{W_1} = \sqrt{\frac{N_r(N_r + 1)(2N_r + 1)}{24}}$$ Hence, if $N_r$ is large, the standardized test statistic $$z = \frac{W_1 - \mu_{W_1}}{\sigma_{W_1}}$$ follows approximately the standard normal distribution if the null hypothesis were true. Sampling distribution of $W_2$: If $N_r$ is large, $W_2$ is approximately normally distributed with mean $0$ and standard deviation $\sigma_{W_2}$ if the null hypothesis were true. Here $$\sigma_{W_2} = \sqrt{\frac{N_r(N_r + 1)(2N_r + 1)}{6}}$$ Hence, if $N_r$ is large, the standardized test statistic $$z = \frac{W_2}{\sigma_{W_2}}$$ follows approximately the standard normal distribution if the null hypothesis were true. If $N_r$ is small, the exact distribution of $W_1$ or $W_2$ should be used. Note: if ties are present in the data, the formula for the standard deviations $\sigma_{W_1}$ and $\sigma_{W_2}$ is more complicated. | If the number of blocks (usually the number of subjects) is large, approximately the chi-squared distribution with $k - 1$ degrees of freedom | |
Significant? | Significant? | Significant? | |
For the model chi-squared test for the complete regression model and likelihood ratio chi-squared test for individual $\beta_k$:
| For large samples, the table for standard normal probabilities can be used: Two sided:
| If the number of blocks is large, the table with critical $X^2$ values can be used. If we denote $X^2 = Q$:
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Wald-type approximate $C\%$ confidence interval for $\beta_k$ | n.a. | n.a. | |
$b_k \pm z^* \times SE_{b_k}$ where the critical value $z^*$ is the value under the normal curve with the area $C / 100$ between $-z^*$ and $z^*$ (e.g. $z^*$ = 1.96 for a 95% confidence interval). | - | - | |
Goodness of fit measure $R^2_L$ | n.a. | n.a. | |
$R^2_L = \dfrac{D_{null} - D_K}{D_{null}}$ There are several other goodness of fit measures in logistic regression. In logistic regression, there is no single agreed upon measure of goodness of fit. | - | - | |
n.a. | n.a. | Equivalent to | |
- | - | Friedman test, with a categorical dependent variable consisting of two independent groups. | |
Example context | Example context | Example context | |
Can body mass index, stress level, and gender predict whether people get diagnosed with diabetes? | Is the median of the differences between the mental health scores before and after an intervention different from 0? | Subjects perform three different tasks, which they can either perform correctly or incorrectly. Is there a difference in task performance between the three different tasks? | |
SPSS | SPSS | SPSS | |
Analyze > Regression > Binary Logistic...
| Analyze > Nonparametric Tests > Legacy Dialogs > 2 Related Samples...
| Analyze > Nonparametric Tests > Legacy Dialogs > K Related Samples...
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Jamovi | Jamovi | Jamovi | |
Regression > 2 Outcomes - Binomial
| T-Tests > Paired Samples T-Test
| Jamovi does not have a specific option for the Cochran's Q test. However, you can do the Friedman test instead. The $p$ value resulting from this Friedman test is equivalent to the $p$ value that would have resulted from the Cochran's Q test. Go to:
ANOVA > Repeated Measures ANOVA - Friedman
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Practice questions | Practice questions | Practice questions | |