Goodness of fit test - overview
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Goodness of fit test | Two sample $t$ test - equal variances assumed | One sample $z$ test for the mean | $z$ test for the difference between two proportions | Two way ANOVA |
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Independent variable | Independent/grouping variable | Independent variable | Independent/grouping variable | Independent/grouping variables | |
None | One categorical with 2 independent groups | None | One categorical with 2 independent groups | Two categorical, the first with $I$ independent groups and the second with $J$ independent groups ($I \geqslant 2$, $J \geqslant 2$) | |
Dependent variable | Dependent variable | Dependent variable | Dependent variable | Dependent variable | |
One categorical with $J$ independent groups ($J \geqslant 2$) | One quantitative of interval or ratio level | One quantitative of interval or ratio level | One categorical with 2 independent groups | One quantitative of interval or ratio level | |
Null hypothesis | Null hypothesis | Null hypothesis | Null hypothesis | Null hypothesis | |
| H0: $\mu_1 = \mu_2$
Here $\mu_1$ is the population mean for group 1, and $\mu_2$ is the population mean for group 2. | H0: $\mu = \mu_0$
Here $\mu$ is the population mean, and $\mu_0$ is the population mean according to the null hypothesis. | H0: $\pi_1 = \pi_2$
Here $\pi_1$ is the population proportion of 'successes' for group 1, and $\pi_2$ is the population proportion of 'successes' for group 2. | ANOVA $F$ tests:
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Alternative hypothesis | Alternative hypothesis | Alternative hypothesis | Alternative hypothesis | Alternative hypothesis | |
| H1 two sided: $\mu_1 \neq \mu_2$ H1 right sided: $\mu_1 > \mu_2$ H1 left sided: $\mu_1 < \mu_2$ | H1 two sided: $\mu \neq \mu_0$ H1 right sided: $\mu > \mu_0$ H1 left sided: $\mu < \mu_0$ | H1 two sided: $\pi_1 \neq \pi_2$ H1 right sided: $\pi_1 > \pi_2$ H1 left sided: $\pi_1 < \pi_2$ | ANOVA $F$ tests:
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Assumptions | Assumptions | Assumptions | Assumptions | Assumptions | |
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Test statistic | Test statistic | Test statistic | Test statistic | Test statistic | |
$X^2 = \sum{\frac{(\mbox{observed cell count} - \mbox{expected cell count})^2}{\mbox{expected cell count}}}$
Here the expected cell count for one cell = $N \times \pi_j$, the observed cell count is the observed sample count in that same cell, and the sum is over all $J$ cells. | $t = \dfrac{(\bar{y}_1 - \bar{y}_2) - 0}{s_p\sqrt{\dfrac{1}{n_1} + \dfrac{1}{n_2}}} = \dfrac{\bar{y}_1 - \bar{y}_2}{s_p\sqrt{\dfrac{1}{n_1} + \dfrac{1}{n_2}}}$
Here $\bar{y}_1$ is the sample mean in group 1, $\bar{y}_2$ is the sample mean in group 2, $s_p$ is the pooled standard deviation, $n_1$ is the sample size of group 1, and $n_2$ is the sample size of group 2. The 0 represents the difference in population means according to the null hypothesis. The denominator $s_p\sqrt{\dfrac{1}{n_1} + \dfrac{1}{n_2}}$ is the standard error of the sampling distribution of $\bar{y}_1 - \bar{y}_2$. The $t$ value indicates how many standard errors $\bar{y}_1 - \bar{y}_2$ is removed from 0. Note: we could just as well compute $\bar{y}_2 - \bar{y}_1$ in the numerator, but then the left sided alternative becomes $\mu_2 < \mu_1$, and the right sided alternative becomes $\mu_2 > \mu_1$. | $z = \dfrac{\bar{y} - \mu_0}{\sigma / \sqrt{N}}$
Here $\bar{y}$ is the sample mean, $\mu_0$ is the population mean according to the null hypothesis, $\sigma$ is the population standard deviation, and $N$ is the sample size. The denominator $\sigma / \sqrt{N}$ is the standard deviation of the sampling distribution of $\bar{y}$. The $z$ value indicates how many of these standard deviations $\bar{y}$ is removed from $\mu_0$. | $z = \dfrac{p_1 - p_2}{\sqrt{p(1 - p)\Bigg(\dfrac{1}{n_1} + \dfrac{1}{n_2}\Bigg)}}$
Here $p_1$ is the sample proportion of successes in group 1: $\dfrac{X_1}{n_1}$, $p_2$ is the sample proportion of successes in group 2: $\dfrac{X_2}{n_2}$, $p$ is the total proportion of successes in the sample: $\dfrac{X_1 + X_2}{n_1 + n_2}$, $n_1$ is the sample size of group 1, and $n_2$ is the sample size of group 2. Note: we could just as well compute $p_2 - p_1$ in the numerator, but then the left sided alternative becomes $\pi_2 < \pi_1$, and the right sided alternative becomes $\pi_2 > \pi_1.$ | For main and interaction effects together (model):
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n.a. | Pooled standard deviation | n.a. | n.a. | Pooled standard deviation | |
- | $s_p = \sqrt{\dfrac{(n_1 - 1) \times s^2_1 + (n_2 - 1) \times s^2_2}{n_1 + n_2 - 2}}$ | - | - | $ \begin{aligned} s_p &= \sqrt{\dfrac{\sum\nolimits_{subjects} (\mbox{subject's score} - \mbox{its group mean})^2}{N - (I \times J)}}\\ &= \sqrt{\dfrac{\mbox{sum of squares error}}{\mbox{degrees of freedom error}}}\\ &= \sqrt{\mbox{mean square error}} \end{aligned} $ | |
Sampling distribution of $X^2$ if H0 were true | Sampling distribution of $t$ if H0 were true | Sampling distribution of $z$ if H0 were true | Sampling distribution of $z$ if H0 were true | Sampling distribution of $F$ if H0 were true | |
Approximately the chi-squared distribution with $J - 1$ degrees of freedom | $t$ distribution with $n_1 + n_2 - 2$ degrees of freedom | Standard normal distribution | Approximately the standard normal distribution | For main and interaction effects together (model):
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Significant? | Significant? | Significant? | Significant? | Significant? | |
| Two sided:
| Two sided:
| Two sided:
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n.a. | $C\%$ confidence interval for $\mu_1 - \mu_2$ | $C\%$ confidence interval for $\mu$ | Approximate $C\%$ confidence interval for $\pi_1 - \pi_2$ | n.a. | |
- | $(\bar{y}_1 - \bar{y}_2) \pm t^* \times s_p\sqrt{\dfrac{1}{n_1} + \dfrac{1}{n_2}}$
where the critical value $t^*$ is the value under the $t_{n_1 + n_2 - 2}$ distribution with the area $C / 100$ between $-t^*$ and $t^*$ (e.g. $t^*$ = 2.086 for a 95% confidence interval when df = 20). The confidence interval for $\mu_1 - \mu_2$ can also be used as significance test. | $\bar{y} \pm z^* \times \dfrac{\sigma}{\sqrt{N}}$
where the critical value $z^*$ is the value under the normal curve with the area $C / 100$ between $-z^*$ and $z^*$ (e.g. $z^*$ = 1.96 for a 95% confidence interval). The confidence interval for $\mu$ can also be used as significance test. | Regular (large sample):
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n.a. | Effect size | Effect size | n.a. | Effect size | |
- | Cohen's $d$: Standardized difference between the mean in group $1$ and in group $2$: $$d = \frac{\bar{y}_1 - \bar{y}_2}{s_p}$$ Cohen's $d$ indicates how many standard deviations $s_p$ the two sample means are removed from each other. | Cohen's $d$: Standardized difference between the sample mean and $\mu_0$: $$d = \frac{\bar{y} - \mu_0}{\sigma}$$ Cohen's $d$ indicates how many standard deviations $\sigma$ the sample mean $\bar{y}$ is removed from $\mu_0.$ | - |
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n.a. | Visual representation | Visual representation | n.a. | n.a. | |
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n.a. | n.a. | n.a. | n.a. | ANOVA table | |
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n.a. | Equivalent to | n.a. | Equivalent to | Equivalent to | |
- | One way ANOVA with an independent variable with 2 levels ($I$ = 2):
| - | When testing two sided: chi-squared test for the relationship between two categorical variables, where both categorical variables have 2 levels. | OLS regression with two categorical independent variables and the interaction term, transformed into $(I - 1)$ + $(J - 1)$ + $(I - 1) \times (J - 1)$ code variables. | |
Example context | Example context | Example context | Example context | Example context | |
Is the proportion of people with a low, moderate, and high social economic status in the population different from $\pi_{low} = 0.2,$ $\pi_{moderate} = 0.6,$ and $\pi_{high} = 0.2$? | Is the average mental health score different between men and women? Assume that in the population, the standard deviation of mental health scores is equal amongst men and women. | Is the average mental health score of office workers different from $\mu_0 = 50$? Assume that the standard deviation of the mental health scores in the population is $\sigma = 3.$ | Is the proportion of smokers different between men and women? Use the normal approximation for the sampling distribution of the test statistic. | Is the average mental health score different between people from a low, moderate, and high economic class? And is the average mental health score different between men and women? And is there an interaction effect between economic class and gender? | |
SPSS | SPSS | n.a. | SPSS | SPSS | |
Analyze > Nonparametric Tests > Legacy Dialogs > Chi-square...
| Analyze > Compare Means > Independent-Samples T Test...
| - | SPSS does not have a specific option for the $z$ test for the difference between two proportions. However, you can do the chi-squared test instead. The $p$ value resulting from this chi-squared test is equivalent to the two sided $p$ value that would have resulted from the $z$ test. Go to:
Analyze > Descriptive Statistics > Crosstabs...
| Analyze > General Linear Model > Univariate...
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Jamovi | Jamovi | n.a. | Jamovi | Jamovi | |
Frequencies > N Outcomes - $\chi^2$ Goodness of fit
| T-Tests > Independent Samples T-Test
| - | Jamovi does not have a specific option for the $z$ test for the difference between two proportions. However, you can do the chi-squared test instead. The $p$ value resulting from this chi-squared test is equivalent to the two sided $p$ value that would have resulted from the $z$ test. Go to:
Frequencies > Independent Samples - $\chi^2$ test of association
| ANOVA > ANOVA
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Practice questions | Practice questions | Practice questions | Practice questions | Practice questions | |