Goodness of fit test  overview
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Goodness of fit test  KruskalWallis test  Cochran's Q test  Marginal Homogeneity test / StuartMaxwell test  Logistic regression 


Independent variable  Independent/grouping variable  Independent/grouping variable  Independent variable  Independent variables  
None  One categorical with $I$ independent groups ($I \geqslant 2$)  One within subject factor ($\geq 2$ related groups)  2 paired groups  One or more quantitative of interval or ratio level and/or one or more categorical with independent groups, transformed into code variables  
Dependent variable  Dependent variable  Dependent variable  Dependent variable  Dependent variable  
One categorical with $J$ independent groups ($J \geqslant 2$)  One of ordinal level  One categorical with 2 independent groups  One categorical with $J$ independent groups ($J \geqslant 2$)  One categorical with 2 independent groups  
Null hypothesis  Null hypothesis  Null hypothesis  Null hypothesis  Null hypothesis  
 If the dependent variable is measured on a continuous scale and the shape of the distribution of the dependent variable is the same in all $I$ populations:
Formulation 1:
 H_{0}: $\pi_1 = \pi_2 = \ldots = \pi_I$
Here $\pi_1$ is the population proportion of 'successes' for group 1, $\pi_2$ is the population proportion of 'successes' for group 2, and $\pi_I$ is the population proportion of 'successes' for group $I.$  H_{0}: for each category $j$ of the dependent variable, $\pi_j$ for the first paired group = $\pi_j$ for the second paired group.
Here $\pi_j$ is the population proportion in category $j.$  Model chisquared test for the complete regression model:
 
Alternative hypothesis  Alternative hypothesis  Alternative hypothesis  Alternative hypothesis  Alternative hypothesis  
 If the dependent variable is measured on a continuous scale and the shape of the distribution of the dependent variable is the same in all $I$ populations:
Formulation 1:
 H_{1}: not all population proportions are equal  H_{1}: for some categories of the dependent variable, $\pi_j$ for the first paired group $\neq$ $\pi_j$ for the second paired group.  Model chisquared test for the complete regression model:
 
Assumptions  Assumptions  Assumptions  Assumptions  Assumptions  




 
Test statistic  Test statistic  Test statistic  Test statistic  Test statistic  
$X^2 = \sum{\frac{(\mbox{observed cell count}  \mbox{expected cell count})^2}{\mbox{expected cell count}}}$
Here the expected cell count for one cell = $N \times \pi_j$, the observed cell count is the observed sample count in that same cell, and the sum is over all $J$ cells.  $H = \dfrac{12}{N (N + 1)} \sum \dfrac{R^2_i}{n_i}  3(N + 1)$  If a failure is scored as 0 and a success is scored as 1:
$Q = k(k  1) \dfrac{\sum_{groups} \Big (\mbox{group total}  \frac{\mbox{grand total}}{k} \Big)^2}{\sum_{blocks} \mbox{block total} \times (k  \mbox{block total})}$ Here $k$ is the number of related groups (usually the number of repeated measurements), a group total is the sum of the scores in a group, a block total is the sum of the scores in a block (usually a subject), and the grand total is the sum of all the scores. Before computing $Q$, first exclude blocks with equal scores in all $k$ groups.  Computing the test statistic is a bit complicated and involves matrix algebra. Unless you are following a technical course, you probably won't need to calculate it by hand.  Model chisquared test for the complete regression model:
The wald statistic can be defined in two ways:
Likelihood ratio chisquared test for individual $\beta_k$:
 
Sampling distribution of $X^2$ if H_{0} were true  Sampling distribution of $H$ if H_{0} were true  Sampling distribution of $Q$ if H_{0} were true  Sampling distribution of the test statistic if H_{0} were true  Sampling distribution of $X^2$ and of the Wald statistic if H_{0} were true  
Approximately the chisquared distribution with $J  1$ degrees of freedom  For large samples, approximately the chisquared distribution with $I  1$ degrees of freedom. For small samples, the exact distribution of $H$ should be used.  If the number of blocks (usually the number of subjects) is large, approximately the chisquared distribution with $k  1$ degrees of freedom  Approximately the chisquared distribution with $J  1$ degrees of freedom  Sampling distribution of $X^2$, as computed in the model chisquared test for the complete model:
 
Significant?  Significant?  Significant?  Significant?  Significant?  
 For large samples, the table with critical $X^2$ values can be used. If we denote $X^2 = H$:
 If the number of blocks is large, the table with critical $X^2$ values can be used. If we denote $X^2 = Q$:
 If we denote the test statistic as $X^2$:
 For the model chisquared test for the complete regression model and likelihood ratio chisquared test for individual $\beta_k$:
 
n.a.  n.a.  n.a.  n.a.  Waldtype approximate $C\%$ confidence interval for $\beta_k$  
        $b_k \pm z^* \times SE_{b_k}$ where the critical value $z^*$ is the value under the normal curve with the area $C / 100$ between $z^*$ and $z^*$ (e.g. $z^*$ = 1.96 for a 95% confidence interval).  
n.a.  n.a.  n.a.  n.a.  Goodness of fit measure $R^2_L$  
        $R^2_L = \dfrac{D_{null}  D_K}{D_{null}}$ There are several other goodness of fit measures in logistic regression. In logistic regression, there is no single agreed upon measure of goodness of fit.  
n.a.  n.a.  Equivalent to  n.a.  n.a.  
    Friedman test, with a categorical dependent variable consisting of two independent groups.      
Example context  Example context  Example context  Example context  Example context  
Is the proportion of people with a low, moderate, and high social economic status in the population different from $\pi_{low} = 0.2,$ $\pi_{moderate} = 0.6,$ and $\pi_{high} = 0.2$?  Do people from different religions tend to score differently on social economic status?  Subjects perform three different tasks, which they can either perform correctly or incorrectly. Is there a difference in task performance between the three different tasks?  Subjects are asked to taste three different types of mayonnaise, and to indicate which of the three types of mayonnaise they like best. They then have to drink a glass of beer, and taste and rate the three types of mayonnaise again. Does drinking a beer change which type of mayonnaise people like best?  Can body mass index, stress level, and gender predict whether people get diagnosed with diabetes?  
SPSS  SPSS  SPSS  SPSS  SPSS  
Analyze > Nonparametric Tests > Legacy Dialogs > Chisquare...
 Analyze > Nonparametric Tests > Legacy Dialogs > K Independent Samples...
 Analyze > Nonparametric Tests > Legacy Dialogs > K Related Samples...
 Analyze > Nonparametric Tests > Legacy Dialogs > 2 Related Samples...
 Analyze > Regression > Binary Logistic...
 
Jamovi  Jamovi  Jamovi  n.a.  Jamovi  
Frequencies > N Outcomes  $\chi^2$ Goodness of fit
 ANOVA > One Way ANOVA  KruskalWallis
 Jamovi does not have a specific option for the Cochran's Q test. However, you can do the Friedman test instead. The $p$ value resulting from this Friedman test is equivalent to the $p$ value that would have resulted from the Cochran's Q test. Go to:
ANOVA > Repeated Measures ANOVA  Friedman
   Regression > 2 Outcomes  Binomial
 
Practice questions  Practice questions  Practice questions  Practice questions  Practice questions  