Goodness of fit test  overview
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Goodness of fit test  KruskalWallis test  Cochran's Q test  Paired sample $t$ test  One sample $t$ test for the mean  Sign test  Friedman test  Two way ANOVA 


Independent variable  Independent/grouping variable  Independent/grouping variable  Independent variable  Independent variable  Independent variable  Independent/grouping variable  Independent/grouping variables  
None  One categorical with $I$ independent groups ($I \geqslant 2$)  One within subject factor ($\geq 2$ related groups)  2 paired groups  None  2 paired groups  One within subject factor ($\geq 2$ related groups)  Two categorical, the first with $I$ independent groups and the second with $J$ independent groups ($I \geqslant 2$, $J \geqslant 2$)  
Dependent variable  Dependent variable  Dependent variable  Dependent variable  Dependent variable  Dependent variable  Dependent variable  Dependent variable  
One categorical with $J$ independent groups ($J \geqslant 2$)  One of ordinal level  One categorical with 2 independent groups  One quantitative of interval or ratio level  One quantitative of interval or ratio level  One of ordinal level  One of ordinal level  One quantitative of interval or ratio level  
Null hypothesis  Null hypothesis  Null hypothesis  Null hypothesis  Null hypothesis  Null hypothesis  Null hypothesis  Null hypothesis  
 If the dependent variable is measured on a continuous scale and the shape of the distribution of the dependent variable is the same in all $I$ populations:
Formulation 1:
 H_{0}: $\pi_1 = \pi_2 = \ldots = \pi_I$
Here $\pi_1$ is the population proportion of 'successes' for group 1, $\pi_2$ is the population proportion of 'successes' for group 2, and $\pi_I$ is the population proportion of 'successes' for group $I.$  H_{0}: $\mu = \mu_0$
Here $\mu$ is the population mean of the difference scores, and $\mu_0$ is the population mean of the difference scores according to the null hypothesis, which is usually 0. A difference score is the difference between the first score of a pair and the second score of a pair.  H_{0}: $\mu = \mu_0$
Here $\mu$ is the population mean, and $\mu_0$ is the population mean according to the null hypothesis. 
 H_{0}: the population scores in any of the related groups are not systematically higher or lower than the population scores in any of the other related groups
Usually the related groups are the different measurement points. Several different formulations of the null hypothesis can be found in the literature, and we do not agree with all of them. Make sure you (also) learn the one that is given in your text book or by your teacher.  ANOVA $F$ tests:
 
Alternative hypothesis  Alternative hypothesis  Alternative hypothesis  Alternative hypothesis  Alternative hypothesis  Alternative hypothesis  Alternative hypothesis  Alternative hypothesis  
 If the dependent variable is measured on a continuous scale and the shape of the distribution of the dependent variable is the same in all $I$ populations:
Formulation 1:
 H_{1}: not all population proportions are equal  H_{1} two sided: $\mu \neq \mu_0$ H_{1} right sided: $\mu > \mu_0$ H_{1} left sided: $\mu < \mu_0$  H_{1} two sided: $\mu \neq \mu_0$ H_{1} right sided: $\mu > \mu_0$ H_{1} left sided: $\mu < \mu_0$ 
 H_{1}: the population scores in some of the related groups are systematically higher or lower than the population scores in other related groups  ANOVA $F$ tests:
 
Assumptions  Assumptions  Assumptions  Assumptions  Assumptions  Assumptions  Assumptions  Assumptions  







 
Test statistic  Test statistic  Test statistic  Test statistic  Test statistic  Test statistic  Test statistic  Test statistic  
$X^2 = \sum{\frac{(\mbox{observed cell count}  \mbox{expected cell count})^2}{\mbox{expected cell count}}}$
Here the expected cell count for one cell = $N \times \pi_j$, the observed cell count is the observed sample count in that same cell, and the sum is over all $J$ cells.  $H = \dfrac{12}{N (N + 1)} \sum \dfrac{R^2_i}{n_i}  3(N + 1)$  If a failure is scored as 0 and a success is scored as 1:
$Q = k(k  1) \dfrac{\sum_{groups} \Big (\mbox{group total}  \frac{\mbox{grand total}}{k} \Big)^2}{\sum_{blocks} \mbox{block total} \times (k  \mbox{block total})}$ Here $k$ is the number of related groups (usually the number of repeated measurements), a group total is the sum of the scores in a group, a block total is the sum of the scores in a block (usually a subject), and the grand total is the sum of all the scores. Before computing $Q$, first exclude blocks with equal scores in all $k$ groups.  $t = \dfrac{\bar{y}  \mu_0}{s / \sqrt{N}}$
Here $\bar{y}$ is the sample mean of the difference scores, $\mu_0$ is the population mean of the difference scores according to the null hypothesis, $s$ is the sample standard deviation of the difference scores, and $N$ is the sample size (number of difference scores). The denominator $s / \sqrt{N}$ is the standard error of the sampling distribution of $\bar{y}$. The $t$ value indicates how many standard errors $\bar{y}$ is removed from $\mu_0$.  $t = \dfrac{\bar{y}  \mu_0}{s / \sqrt{N}}$
Here $\bar{y}$ is the sample mean, $\mu_0$ is the population mean according to the null hypothesis, $s$ is the sample standard deviation, and $N$ is the sample size. The denominator $s / \sqrt{N}$ is the standard error of the sampling distribution of $\bar{y}$. The $t$ value indicates how many standard errors $\bar{y}$ is removed from $\mu_0$.  $W = $ number of difference scores that is larger than 0  $Q = \dfrac{12}{N \times k(k + 1)} \sum R^2_i  3 \times N(k + 1)$
Here $N$ is the number of 'blocks' (usually the subjects  so if you have 4 repeated measurements for 60 subjects, $N$ equals 60), $k$ is the number of related groups (usually the number of repeated measurements), and $R_i$ is the sum of ranks in group $i$. Remember that multiplication precedes addition, so first compute $\frac{12}{N \times k(k + 1)} \times \sum R^2_i$ and then subtract $3 \times N(k + 1)$. Note: if ties are present in the data, the formula for $Q$ is more complicated.  For main and interaction effects together (model):
 
n.a.  n.a.  n.a.  n.a.  n.a.  n.a.  n.a.  Pooled standard deviation  
              $ \begin{aligned} s_p &= \sqrt{\dfrac{\sum\nolimits_{subjects} (\mbox{subject's score}  \mbox{its group mean})^2}{N  (I \times J)}}\\ &= \sqrt{\dfrac{\mbox{sum of squares error}}{\mbox{degrees of freedom error}}}\\ &= \sqrt{\mbox{mean square error}} \end{aligned} $  
Sampling distribution of $X^2$ if H_{0} were true  Sampling distribution of $H$ if H_{0} were true  Sampling distribution of $Q$ if H_{0} were true  Sampling distribution of $t$ if H_{0} were true  Sampling distribution of $t$ if H_{0} were true  Sampling distribution of $W$ if H_{0} were true  Sampling distribution of $Q$ if H_{0} were true  Sampling distribution of $F$ if H_{0} were true  
Approximately the chisquared distribution with $J  1$ degrees of freedom  For large samples, approximately the chisquared distribution with $I  1$ degrees of freedom. For small samples, the exact distribution of $H$ should be used.  If the number of blocks (usually the number of subjects) is large, approximately the chisquared distribution with $k  1$ degrees of freedom  $t$ distribution with $N  1$ degrees of freedom  $t$ distribution with $N  1$ degrees of freedom  The exact distribution of $W$ under the null hypothesis is the Binomial($n$, $P$) distribution, with $n =$ number of positive differences $+$ number of negative differences, and $P = 0.5$.
If $n$ is large, $W$ is approximately normally distributed under the null hypothesis, with mean $nP = n \times 0.5$ and standard deviation $\sqrt{nP(1P)} = \sqrt{n \times 0.5(1  0.5)}$. Hence, if $n$ is large, the standardized test statistic $$z = \frac{W  n \times 0.5}{\sqrt{n \times 0.5(1  0.5)}}$$ follows approximately the standard normal distribution if the null hypothesis were true.  If the number of blocks $N$ is large, approximately the chisquared distribution with $k  1$ degrees of freedom.
For small samples, the exact distribution of $Q$ should be used.  For main and interaction effects together (model):
 
Significant?  Significant?  Significant?  Significant?  Significant?  Significant?  Significant?  Significant?  
 For large samples, the table with critical $X^2$ values can be used. If we denote $X^2 = H$:
 If the number of blocks is large, the table with critical $X^2$ values can be used. If we denote $X^2 = Q$:
 Two sided:
 Two sided:
 If $n$ is small, the table for the binomial distribution should be used: Two sided:
If $n$ is large, the table for standard normal probabilities can be used: Two sided:
 If the number of blocks $N$ is large, the table with critical $X^2$ values can be used. If we denote $X^2 = Q$:

 
n.a.  n.a.  n.a.  $C\%$ confidence interval for $\mu$  $C\%$ confidence interval for $\mu$  n.a.  n.a.  n.a.  
      $\bar{y} \pm t^* \times \dfrac{s}{\sqrt{N}}$
where the critical value $t^*$ is the value under the $t_{N1}$ distribution with the area $C / 100$ between $t^*$ and $t^*$ (e.g. $t^*$ = 2.086 for a 95% confidence interval when df = 20). The confidence interval for $\mu$ can also be used as significance test.  $\bar{y} \pm t^* \times \dfrac{s}{\sqrt{N}}$
where the critical value $t^*$ is the value under the $t_{N1}$ distribution with the area $C / 100$ between $t^*$ and $t^*$ (e.g. $t^*$ = 2.086 for a 95% confidence interval when df = 20). The confidence interval for $\mu$ can also be used as significance test.        
n.a.  n.a.  n.a.  Effect size  Effect size  n.a.  n.a.  Effect size  
      Cohen's $d$: Standardized difference between the sample mean of the difference scores and $\mu_0$: $$d = \frac{\bar{y}  \mu_0}{s}$$ Cohen's $d$ indicates how many standard deviations $s$ the sample mean of the difference scores $\bar{y}$ is removed from $\mu_0.$  Cohen's $d$: Standardized difference between the sample mean and $\mu_0$: $$d = \frac{\bar{y}  \mu_0}{s}$$ Cohen's $d$ indicates how many standard deviations $s$ the sample mean $\bar{y}$ is removed from $\mu_0.$     
 
n.a.  n.a.  n.a.  Visual representation  Visual representation  n.a.  n.a.  n.a.  
            
n.a.  n.a.  n.a.  n.a.  n.a.  n.a.  n.a.  ANOVA table  
              
n.a.  n.a.  Equivalent to  Equivalent to  n.a.  Equivalent to  n.a.  Equivalent to  
    Friedman test, with a categorical dependent variable consisting of two independent groups. 
  
Two sided sign test is equivalent to
   OLS regression with two categorical independent variables and the interaction term, transformed into $(I  1)$ + $(J  1)$ + $(I  1) \times (J  1)$ code variables.  
Example context  Example context  Example context  Example context  Example context  Example context  Example context  Example context  
Is the proportion of people with a low, moderate, and high social economic status in the population different from $\pi_{low} = 0.2,$ $\pi_{moderate} = 0.6,$ and $\pi_{high} = 0.2$?  Do people from different religions tend to score differently on social economic status?  Subjects perform three different tasks, which they can either perform correctly or incorrectly. Is there a difference in task performance between the three different tasks?  Is the average difference between the mental health scores before and after an intervention different from $\mu_0 = 0$?  Is the average mental health score of office workers different from $\mu_0 = 50$?  Do people tend to score higher on mental health after a mindfulness course?  Is there a difference in depression level between measurement point 1 (preintervention), measurement point 2 (1 week postintervention), and measurement point 3 (6 weeks postintervention)?  Is the average mental health score different between people from a low, moderate, and high economic class? And is the average mental health score different between men and women? And is there an interaction effect between economic class and gender?  
SPSS  SPSS  SPSS  SPSS  SPSS  SPSS  SPSS  SPSS  
Analyze > Nonparametric Tests > Legacy Dialogs > Chisquare...
 Analyze > Nonparametric Tests > Legacy Dialogs > K Independent Samples...
 Analyze > Nonparametric Tests > Legacy Dialogs > K Related Samples...
 Analyze > Compare Means > PairedSamples T Test...
 Analyze > Compare Means > OneSample T Test...
 Analyze > Nonparametric Tests > Legacy Dialogs > 2 Related Samples...
 Analyze > Nonparametric Tests > Legacy Dialogs > K Related Samples...
 Analyze > General Linear Model > Univariate...
 
Jamovi  Jamovi  Jamovi  Jamovi  Jamovi  Jamovi  Jamovi  Jamovi  
Frequencies > N Outcomes  $\chi^2$ Goodness of fit
 ANOVA > One Way ANOVA  KruskalWallis
 Jamovi does not have a specific option for the Cochran's Q test. However, you can do the Friedman test instead. The $p$ value resulting from this Friedman test is equivalent to the $p$ value that would have resulted from the Cochran's Q test. Go to:
ANOVA > Repeated Measures ANOVA  Friedman
 TTests > Paired Samples TTest
 TTests > One Sample TTest
 Jamovi does not have a specific option for the sign test. However, you can do the Friedman test instead. The $p$ value resulting from this Friedman test is equivalent to the two sided $p$ value that would have resulted from the sign test. Go to:
ANOVA > Repeated Measures ANOVA  Friedman
 ANOVA > Repeated Measures ANOVA  Friedman
 ANOVA > ANOVA
 
Practice questions  Practice questions  Practice questions  Practice questions  Practice questions  Practice questions  Practice questions  Practice questions  