Cochran's Q test - overview
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Cochran's Q test | Two sample $t$ test - equal variances assumed | Two sample $z$ test |
You cannot compare more than 3 methods |
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Independent/grouping variable | Independent/grouping variable | Independent/grouping variable | |
One within subject factor ($\geq 2$ related groups) | One categorical with 2 independent groups | One categorical with 2 independent groups | |
Dependent variable | Dependent variable | Dependent variable | |
One categorical with 2 independent groups | One quantitative of interval or ratio level | One quantitative of interval or ratio level | |
Null hypothesis | Null hypothesis | Null hypothesis | |
H0: $\pi_1 = \pi_2 = \ldots = \pi_I$
Here $\pi_1$ is the population proportion of 'successes' for group 1, $\pi_2$ is the population proportion of 'successes' for group 2, and $\pi_I$ is the population proportion of 'successes' for group $I.$ | H0: $\mu_1 = \mu_2$
Here $\mu_1$ is the population mean for group 1, and $\mu_2$ is the population mean for group 2. | H0: $\mu_1 = \mu_2$
Here $\mu_1$ is the population mean for group 1, and $\mu_2$ is the population mean for group 2. | |
Alternative hypothesis | Alternative hypothesis | Alternative hypothesis | |
H1: not all population proportions are equal | H1 two sided: $\mu_1 \neq \mu_2$ H1 right sided: $\mu_1 > \mu_2$ H1 left sided: $\mu_1 < \mu_2$ | H1 two sided: $\mu_1 \neq \mu_2$ H1 right sided: $\mu_1 > \mu_2$ H1 left sided: $\mu_1 < \mu_2$ | |
Assumptions | Assumptions | Assumptions | |
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Test statistic | Test statistic | Test statistic | |
If a failure is scored as 0 and a success is scored as 1:
$Q = k(k - 1) \dfrac{\sum_{groups} \Big (\mbox{group total} - \frac{\mbox{grand total}}{k} \Big)^2}{\sum_{blocks} \mbox{block total} \times (k - \mbox{block total})}$ Here $k$ is the number of related groups (usually the number of repeated measurements), a group total is the sum of the scores in a group, a block total is the sum of the scores in a block (usually a subject), and the grand total is the sum of all the scores. Before computing $Q$, first exclude blocks with equal scores in all $k$ groups. | $t = \dfrac{(\bar{y}_1 - \bar{y}_2) - 0}{s_p\sqrt{\dfrac{1}{n_1} + \dfrac{1}{n_2}}} = \dfrac{\bar{y}_1 - \bar{y}_2}{s_p\sqrt{\dfrac{1}{n_1} + \dfrac{1}{n_2}}}$
Here $\bar{y}_1$ is the sample mean in group 1, $\bar{y}_2$ is the sample mean in group 2, $s_p$ is the pooled standard deviation, $n_1$ is the sample size of group 1, and $n_2$ is the sample size of group 2. The 0 represents the difference in population means according to the null hypothesis. The denominator $s_p\sqrt{\dfrac{1}{n_1} + \dfrac{1}{n_2}}$ is the standard error of the sampling distribution of $\bar{y}_1 - \bar{y}_2$. The $t$ value indicates how many standard errors $\bar{y}_1 - \bar{y}_2$ is removed from 0. Note: we could just as well compute $\bar{y}_2 - \bar{y}_1$ in the numerator, but then the left sided alternative becomes $\mu_2 < \mu_1$, and the right sided alternative becomes $\mu_2 > \mu_1$. | $z = \dfrac{(\bar{y}_1 - \bar{y}_2) - 0}{\sqrt{\dfrac{\sigma^2_1}{n_1} + \dfrac{\sigma^2_2}{n_2}}} = \dfrac{\bar{y}_1 - \bar{y}_2}{\sqrt{\dfrac{\sigma^2_1}{n_1} + \dfrac{\sigma^2_2}{n_2}}}$
Here $\bar{y}_1$ is the sample mean in group 1, $\bar{y}_2$ is the sample mean in group 2, $\sigma^2_1$ is the population variance in population 1, $\sigma^2_2$ is the population variance in population 2, $n_1$ is the sample size of group 1, and $n_2$ is the sample size of group 2. The 0 represents the difference in population means according to the null hypothesis. The denominator $\sqrt{\frac{\sigma^2_1}{n_1} + \frac{\sigma^2_2}{n_2}}$ is the standard deviation of the sampling distribution of $\bar{y}_1 - \bar{y}_2$. The $z$ value indicates how many of these standard deviations $\bar{y}_1 - \bar{y}_2$ is removed from 0. Note: we could just as well compute $\bar{y}_2 - \bar{y}_1$ in the numerator, but then the left sided alternative becomes $\mu_2 < \mu_1$, and the right sided alternative becomes $\mu_2 > \mu_1$. | |
n.a. | Pooled standard deviation | n.a. | |
- | $s_p = \sqrt{\dfrac{(n_1 - 1) \times s^2_1 + (n_2 - 1) \times s^2_2}{n_1 + n_2 - 2}}$ | - | |
Sampling distribution of $Q$ if H0 were true | Sampling distribution of $t$ if H0 were true | Sampling distribution of $z$ if H0 were true | |
If the number of blocks (usually the number of subjects) is large, approximately the chi-squared distribution with $k - 1$ degrees of freedom | $t$ distribution with $n_1 + n_2 - 2$ degrees of freedom | Standard normal distribution | |
Significant? | Significant? | Significant? | |
If the number of blocks is large, the table with critical $X^2$ values can be used. If we denote $X^2 = Q$:
| Two sided:
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n.a. | $C\%$ confidence interval for $\mu_1 - \mu_2$ | $C\%$ confidence interval for $\mu_1 - \mu_2$ | |
- | $(\bar{y}_1 - \bar{y}_2) \pm t^* \times s_p\sqrt{\dfrac{1}{n_1} + \dfrac{1}{n_2}}$
where the critical value $t^*$ is the value under the $t_{n_1 + n_2 - 2}$ distribution with the area $C / 100$ between $-t^*$ and $t^*$ (e.g. $t^*$ = 2.086 for a 95% confidence interval when df = 20). The confidence interval for $\mu_1 - \mu_2$ can also be used as significance test. | $(\bar{y}_1 - \bar{y}_2) \pm z^* \times \sqrt{\dfrac{\sigma^2_1}{n_1} + \dfrac{\sigma^2_2}{n_2}}$
where the critical value $z^*$ is the value under the normal curve with the area $C / 100$ between $-z^*$ and $z^*$ (e.g. $z^*$ = 1.96 for a 95% confidence interval). The confidence interval for $\mu_1 - \mu_2$ can also be used as significance test. | |
n.a. | Effect size | n.a. | |
- | Cohen's $d$: Standardized difference between the mean in group $1$ and in group $2$: $$d = \frac{\bar{y}_1 - \bar{y}_2}{s_p}$$ Cohen's $d$ indicates how many standard deviations $s_p$ the two sample means are removed from each other. | - | |
n.a. | Visual representation | Visual representation | |
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Equivalent to | Equivalent to | n.a. | |
Friedman test, with a categorical dependent variable consisting of two independent groups. | One way ANOVA with an independent variable with 2 levels ($I$ = 2):
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Example context | Example context | Example context | |
Subjects perform three different tasks, which they can either perform correctly or incorrectly. Is there a difference in task performance between the three different tasks? | Is the average mental health score different between men and women? Assume that in the population, the standard deviation of mental health scores is equal amongst men and women. | Is the average mental health score different between men and women? Assume that in the population, the standard devation of the mental health scores is $\sigma_1 = 2$ amongst men and $\sigma_2 = 2.5$ amongst women. | |
SPSS | SPSS | n.a. | |
Analyze > Nonparametric Tests > Legacy Dialogs > K Related Samples...
| Analyze > Compare Means > Independent-Samples T Test...
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Jamovi | Jamovi | n.a. | |
Jamovi does not have a specific option for the Cochran's Q test. However, you can do the Friedman test instead. The $p$ value resulting from this Friedman test is equivalent to the $p$ value that would have resulted from the Cochran's Q test. Go to:
ANOVA > Repeated Measures ANOVA - Friedman
| T-Tests > Independent Samples T-Test
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Practice questions | Practice questions | Practice questions | |