Cochran's Q test  overview
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Cochran's Q test  One sample $z$ test for the mean  MannWhitneyWilcoxon test 


Independent/grouping variable  Independent variable  Independent/grouping variable  
One within subject factor ($\geq 2$ related groups)  None  One categorical with 2 independent groups  
Dependent variable  Dependent variable  Dependent variable  
One categorical with 2 independent groups  One quantitative of interval or ratio level  One of ordinal level  
Null hypothesis  Null hypothesis  Null hypothesis  
H_{0}: $\pi_1 = \pi_2 = \ldots = \pi_I$
Here $\pi_1$ is the population proportion of 'successes' for group 1, $\pi_2$ is the population proportion of 'successes' for group 2, and $\pi_I$ is the population proportion of 'successes' for group $I.$  H_{0}: $\mu = \mu_0$
Here $\mu$ is the population mean, and $\mu_0$ is the population mean according to the null hypothesis.  If the dependent variable is measured on a continuous scale and the shape of the distribution of the dependent variable is the same in both populations:
Formulation 1:
 
Alternative hypothesis  Alternative hypothesis  Alternative hypothesis  
H_{1}: not all population proportions are equal  H_{1} two sided: $\mu \neq \mu_0$ H_{1} right sided: $\mu > \mu_0$ H_{1} left sided: $\mu < \mu_0$  If the dependent variable is measured on a continuous scale and the shape of the distribution of the dependent variable is the same in both populations:
Formulation 1:
 
Assumptions  Assumptions  Assumptions  


 
Test statistic  Test statistic  Test statistic  
If a failure is scored as 0 and a success is scored as 1:
$Q = k(k  1) \dfrac{\sum_{groups} \Big (\mbox{group total}  \frac{\mbox{grand total}}{k} \Big)^2}{\sum_{blocks} \mbox{block total} \times (k  \mbox{block total})}$ Here $k$ is the number of related groups (usually the number of repeated measurements), a group total is the sum of the scores in a group, a block total is the sum of the scores in a block (usually a subject), and the grand total is the sum of all the scores. Before computing $Q$, first exclude blocks with equal scores in all $k$ groups.  $z = \dfrac{\bar{y}  \mu_0}{\sigma / \sqrt{N}}$
Here $\bar{y}$ is the sample mean, $\mu_0$ is the population mean according to the null hypothesis, $\sigma$ is the population standard deviation, and $N$ is the sample size. The denominator $\sigma / \sqrt{N}$ is the standard deviation of the sampling distribution of $\bar{y}$. The $z$ value indicates how many of these standard deviations $\bar{y}$ is removed from $\mu_0$.  Two different types of test statistics can be used; both will result in the same test outcome. The first is the Wilcoxon rank sum statistic $W$:
Note: we could just as well base W and U on group 2. This would only 'flip' the right and left sided alternative hypotheses. Also, tables with critical values for $U$ are often based on the smaller of $U$ for group 1 and for group 2.  
Sampling distribution of $Q$ if H_{0} were true  Sampling distribution of $z$ if H_{0} were true  Sampling distribution of $W$ and of $U$ if H_{0} were true  
If the number of blocks (usually the number of subjects) is large, approximately the chisquared distribution with $k  1$ degrees of freedom  Standard normal distribution  Sampling distribution of $W$:
Sampling distribution of $U$: For small samples, the exact distribution of $W$ or $U$ should be used. Note: if ties are present in the data, the formula for the standard deviations $\sigma_W$ and $\sigma_U$ is more complicated.  
Significant?  Significant?  Significant?  
If the number of blocks is large, the table with critical $X^2$ values can be used. If we denote $X^2 = Q$:
 Two sided:
 For large samples, the table for standard normal probabilities can be used: Two sided:
 
n.a.  $C\%$ confidence interval for $\mu$  n.a.  
  $\bar{y} \pm z^* \times \dfrac{\sigma}{\sqrt{N}}$
where the critical value $z^*$ is the value under the normal curve with the area $C / 100$ between $z^*$ and $z^*$ (e.g. $z^*$ = 1.96 for a 95% confidence interval). The confidence interval for $\mu$ can also be used as significance test.    
n.a.  Effect size  n.a.  
  Cohen's $d$: Standardized difference between the sample mean and $\mu_0$: $$d = \frac{\bar{y}  \mu_0}{\sigma}$$ Cohen's $d$ indicates how many standard deviations $\sigma$ the sample mean $\bar{y}$ is removed from $\mu_0.$    
n.a.  Visual representation  n.a.  
    
Equivalent to  n.a.  Equivalent to  
Friedman test, with a categorical dependent variable consisting of two independent groups.    If there are no ties in the data, the two sided MannWhitneyWilcoxon test is equivalent to the KruskalWallis test with an independent variable with 2 levels ($I$ = 2).  
Example context  Example context  Example context  
Subjects perform three different tasks, which they can either perform correctly or incorrectly. Is there a difference in task performance between the three different tasks?  Is the average mental health score of office workers different from $\mu_0 = 50$? Assume that the standard deviation of the mental health scores in the population is $\sigma = 3.$  Do men tend to score higher on social economic status than women?  
SPSS  n.a.  SPSS  
Analyze > Nonparametric Tests > Legacy Dialogs > K Related Samples...
   Analyze > Nonparametric Tests > Legacy Dialogs > 2 Independent Samples...
 
Jamovi  n.a.  Jamovi  
Jamovi does not have a specific option for the Cochran's Q test. However, you can do the Friedman test instead. The $p$ value resulting from this Friedman test is equivalent to the $p$ value that would have resulted from the Cochran's Q test. Go to:
ANOVA > Repeated Measures ANOVA  Friedman
   TTests > Independent Samples TTest
 
Practice questions  Practice questions  Practice questions  